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Commit 5b5c59fe authored by Pierre Cazenave's avatar Pierre Cazenave

Fix a few problems with accessing the POLCOMS data due to the new way it's...

Fix a few problems with accessing the POLCOMS data due to the new way it's stored in the pc struct. Also change the way the depth values are interpolated (onto the sigma layers rather than sigma levels
parent b175de75
......@@ -95,9 +95,9 @@ netcdf.close(nc)
% Data format:
% pc.ETW and pc.x1X are y, x, sigma, time
% pc.ETW.data and pc.x1X.data are y, x, sigma, time
[~, ~, nz, nt] = size(pc.ETW);
[~, ~, nz, nt] = size(pc.ETW.data);
% Make rectangular arrays for the nearest point lookup.
[lon, lat] = meshgrid(pc.lon.data, pc.lat.data);
......@@ -108,8 +108,8 @@ fvlat = Mobj.lat(Mobj.obc_nodes(Mobj.obc_nodes ~= 0));
% Number of boundary nodes
nf = sum(Mobj.nObcNodes);
% Number of sigma levels (although we actually need layers...)
fz = size(Mobj.sigmaz, 2);
% Number of sigma layers.
fz = size(Mobj.siglayz, 2);
% itemp = nan(nf, nz, nt); % POLCOMS interpolated temperatures
% isal = nan(nf, nz, nt); % POLCOMS interpolated salinities
......@@ -121,8 +121,8 @@ if ftbverbose
for t = 1:nt
% Get the current 3D array of POLCOMS results.
pctemp3 = pc.ETW(:, :, :, t);
pcsal3 = pc.x1X(:, :, :, t);
pctemp3 = pc.ETW.data(:, :, :, t);
pcsal3 = pc.x1X.data(:, :, :, t);
% Preallocate the intermediate results arrays.
itempz = nan(nf, nz);
......@@ -212,7 +212,7 @@ for t = 1:nt
for zi = 1:fz
for pp = 1:nf
% Get the FVCOM depths at this node
tfz = Mobj.sigmaz(oNodes(pp), :);
tfz = Mobj.siglayz(oNodes(pp), :);
% Now get the interpolated POLCOMS depth at this node
tpz = idepthz(pp, :);
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