default_run.nml 14.6 KB
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 !================================================================!
   _______  _     _  _______  _______  _______  ______     _____  
  (_______)(_)   (_)(_______)(_______)(_______)(_____ \   (_____) 
   _____    _     _  _        _     _  _  _  _  _____) )  _  __ _ 
  |  ___)  | |   | || |      | |   | || ||_|| |(_____ (  | |/ /| |
  | |       \ \ / / | |_____ | |___| || |   | | _____) )_|   /_| |
  |_|        \___/   \______) \_____/ |_|   |_|(______/(_)\_____/ 
  -- Beta Release
 !================================================================!
 !                                                                !
 !========DOMAIN DECOMPOSITION USING: METIS 4.0.1 ================!
 !======Copyright 1998, Regents of University of Minnesota========!
 !                                                                !
&NML_CASE
 CASE_TITLE="'AN FVCOM CASE DESCRIPTION' - note string must be in 'quotes'                   ",
 TIMEZONE="Select Time Zone or for idealized case select 'none' (start time=0.0)           ",
 DATE_FORMAT="A three letter string specify date format: 'YMD' or 'DMY'                       ",
 DATE_REFERENCE="Date (specified as a string -- example '2007-11-05 00:00:00') or 'default'      ",
 START_DATE="Date and Time are specified as a string (example '2007-11-05 00:00:00')         ",
 END_DATE="For an idealized case specify 'seconds=(flt)','days=(flt)', or 'cycles=(int)'   ",
 /
&NML_STARTUP
 STARTUP_TYPE="'hotstart', 'coldstart', 'forecast' or 'crashrestart'                           ",
 STARTUP_FILE="default_restart.nc                                                              ",
 STARTUP_UV_TYPE="'default' or 'set values'                                                       ",
 STARTUP_TURB_TYPE="'default' or 'set values'                                                       ",
 STARTUP_TS_TYPE="'constant' 'linear' 'observed' or 'set values'                                  ",
 STARTUP_T_VALS= 2*-99.000000000000000      ,
 STARTUP_S_VALS= 2*-99.000000000000000      ,
 STARTUP_U_VALS= -99.000000000000000     ,
 STARTUP_V_VALS= -99.000000000000000     ,
 STARTUP_DMAX= -99.000000000000000     ,
 /
&NML_IO
 INPUT_DIR="/Your/relative/path/to/input/files                                              ",
 OUTPUT_DIR="/Your/relative/path/to/output/files :Must already exist!                        ",
 IREPORT=          0,
 VISIT_ALL_VARS=F,
 WAIT_FOR_VISIT=F,
 USE_MPI_IO_MODE=F,
 /
&NML_INTEGRATION
 EXTSTEP_SECONDS=  0.0000000000000000     ,
 ISPLIT=          0,
 IRAMP=          0,
 MIN_DEPTH=  0.0000000000000000     ,
 STATIC_SSH_ADJ=  0.0000000000000000     ,
 /
&NML_RESTART
 RST_ON=F,
 RST_FIRST_OUT="Date to start RESTART OUTPUT: Format the same as START_DATE                     ",
 RST_OUT_INTERVAL="A length of time: 'seconds= ','days= ', or 'cycles= '                           ",
 RST_OUTPUT_STACK=          0,
 /
&NML_NETCDF
 NC_ON=F,
 NC_FIRST_OUT="Date to start NETCDF OUTPUT: Format the same as START_DATE                      ",
 NC_OUT_INTERVAL="A length of time: 'seconds= ','days= ', or 'cycles= '                           ",
 NC_OUTPUT_STACK=          0,
 NC_SUBDOMAIN_FILES="FVCOM                                                                                                                   ",
 NC_GRID_METRICS=F,
 NC_FILE_DATE=F,
 NC_VELOCITY=F,
 NC_SALT_TEMP=F,
 NC_TURBULENCE=F,
 NC_AVERAGE_VEL=F,
 NC_VERTICAL_VEL=F,
 NC_WIND_VEL=F,
 NC_WIND_STRESS=F,
 NC_ATM_PRESS=F,
 NC_EVAP_PRECIP=F,
 NC_SURFACE_HEAT=F,
 NC_GROUNDWATER=F,
 NC_BIO=F,
 NC_WQM=F,
 NC_VORTICITY=F,
 /
&NML_NETCDF_AV
 NCAV_ON=F,
 NCAV_FIRST_OUT="Date to start NETCDF interval averaged output: Format the same as START_DATE    ",
 NCAV_OUT_INTERVAL="A length of time: 'seconds= ','days= ', or 'cycles= '                           ",
 NCAV_OUTPUT_STACK=          0,
 NCAV_SUBDOMAIN_FILES="FVCOM                                                                                                                   ",
 NCAV_GRID_METRICS=F,
 NCAV_FILE_DATE=F,
 NCAV_VELOCITY=F,
 NCAV_SALT_TEMP=F,
 NCAV_TURBULENCE=F,
 NCAV_AVERAGE_VEL=F,
 NCAV_VERTICAL_VEL=F,
 NCAV_WIND_VEL=F,
 NCAV_WIND_STRESS=F,
 NCAV_ATM_PRESS=F,
 NCAV_EVAP_PRECIP=F,
 NCAV_SURFACE_HEAT=F,
 NCAV_GROUNDWATER=F,
 NCAV_BIO=F,
 NCAV_WQM=F,
 NCAV_VORTICITY=F,
 /
&NML_SURFACE_FORCING
 WIND_ON=F,
 WIND_TYPE="Options::speed,stress                                                           ",
 WIND_FILE="default_wnd.nc                                                                  ",
 WIND_KIND="Options:constant,static,time dependant,periodic,variable                        ",
 WIND_X=  0.0000000000000000     ,
 WIND_Y=  0.0000000000000000     ,
 HEATING_ON=F,
 HEATING_TYPE="'body' or 'flux'                                                                ",
 HEATING_KIND="Options:constant,static,time dependant,periodic,variable                        ",
 HEATING_FILE="default_hfx.nc                                                                  ",
 HEATING_LONGWAVE_LENGTHSCALE=  1.3999999999999999     ,
 HEATING_LONGWAVE_PERCTAGE= 0.78000000000000003     ,
 HEATING_SHORTWAVE_LENGTHSCALE=  6.2999999999999998     ,
 HEATING_RADIATION=  0.0000000000000000     ,
 HEATING_NETFLUX=  0.0000000000000000     ,
 PRECIPITATION_ON=F,
 PRECIPITATION_KIND="Options:constant,static,time dependant,periodic,variable                        ",
 PRECIPITATION_FILE="default_emp.nc                                                                  ",
 PRECIPITATION_PRC=  0.0000000000000000     ,
 PRECIPITATION_EVP=  0.0000000000000000     ,
 AIRPRESSURE_ON=F,
 AIRPRESSURE_KIND="Options:constant,static,time dependant,periodic,variable                        ",
 AIRPRESSURE_FILE="default_aip.nc                                                                  ",
 AIRPRESSURE_VALUE=  0.0000000000000000     ,
 WAVE_ON=F,
 WAVE_FILE="default_wav.nc                                                                  ",
 WAVE_KIND="Options:constant,static,time dependant,periodic,variable                        ",
 WAVE_HEIGHT=  0.0000000000000000     ,
 WAVE_LENGTH=  0.0000000000000000     ,
 WAVE_DIRECTION=  0.0000000000000000     ,
 WAVE_PERIOD=  0.0000000000000000     ,
 WAVE_PER_BOT=  0.0000000000000000     ,
 WAVE_UB_BOT=  0.0000000000000000     ,
 /
&NML_PHYSICS
 HORIZONTAL_MIXING_TYPE="'closure' or 'constant'                                                         ",
 HORIZONTAL_MIXING_FILE="default_hvc.nc                                                                  ",
 HORIZONTAL_MIXING_KIND="Options:constant,static                                                         ",
 HORIZONTAL_MIXING_COEFFICIENT= -1.0000000000000000     ,
 HORIZONTAL_PRANDTL_NUMBER= -1.0000000000000000     ,
 VERTICAL_MIXING_TYPE="'closure' or 'constant'                                                         ",
 VERTICAL_MIXING_COEFFICIENT= -1.0000000000000000     ,
 VERTICAL_PRANDTL_NUMBER= -1.0000000000000000     ,
 BOTTOM_ROUGHNESS_TYPE="'orig', or 'gotm'; Select your bottom roughness equation (brough.F)             ",
 BOTTOM_ROUGHNESS_KIND="Options:constant,static                                                         ",
 BOTTOM_ROUGHNESS_FILE="default_brf.nc                                                                  ",
 BOTTOM_ROUGHNESS_LENGTHSCALE= -1.0000000000000000     ,
 BOTTOM_ROUGHNESS_MINIMUM= -1.0000000000000000     ,
 CONVECTIVE_OVERTURNING=F,
 SCALAR_POSITIVITY_CONTROL=F,
 BAROTROPIC=F,
 BAROCLINIC_PRESSURE_GRADIENT="'sigma levels' or 'z coordinates'; select method of calculation                 ",
 SEA_WATER_DENSITY_FUNCTION="'dens1', 'dens2', or 'dens3; Select your equation of state (eqs_of_state.F)     ",
 RECALCULATE_RHO_MEAN=F,
 INTERVAL_RHO_MEAN="A length of time or number of cycles in standard format                         ",
 TEMPERATURE_ACTIVE=F,
 SALINITY_ACTIVE=F,
 SURFACE_WAVE_MIXING=F,
 WETTING_DRYING_ON=F,
 ADCOR_ON=T,
 EQUATOR_BETA_PLANE=F,
 NOFLUX_BOT_CONDITION=T,
 /
&NML_RIVER_TYPE
 RIVER_NUMBER=         -1,
 RIVER_KIND="Options:periodic or variable                                                    ",
 RIVER_TS_SETTING="'calculated' or 'specified'                                                     ",
 RIVER_INFO_FILE="'default' or 'filename'                                                         ",
 RIVER_INFLOW_LOCATION="'node' or 'edge'                                                                ",
 /
&NML_RIVER
 RIVER_NAME="River Name in netcdf data file; use mulitple namelists for multiple rivers!     ",
 RIVER_FILE="default_riv.nc                                                                  ",
 RIVER_GRID_LOCATION=         -1,
 RIVER_VERTICAL_DISTRIBUTION= 100*-99.000000000000000      ,
 /
&NML_OPEN_BOUNDARY_CONTROL
 OBC_ON=F,
 OBC_NODE_LIST_FILE="default_obc.dat                                                                 ",
 OBC_ELEVATION_FORCING_ON=F,
 OBC_ELEVATION_FILE="default_obc.nc                                                                  ",
 OBC_TS_TYPE=         -1,
 OBC_TEMP_NUDGING=F,
 OBC_TEMP_FILE="default_obc.nc                                                                  ",
 OBC_TEMP_NUDGING_TIMESCALE=  0.0000000000000000     ,
 OBC_SALT_NUDGING=F,
 OBC_SALT_FILE="default_obc.nc                                                                  ",
 OBC_SALT_NUDGING_TIMESCALE=  0.0000000000000000     ,
 OBC_MEANFLOW=F,
 OBC_MEANFLOW_FILE="default_obc.nc                                                                  ",
 OBC_TIDEOUT_INITIAL=          0,
 OBC_TIDEOUT_INTERVAL=          0,
 OBC_LONGSHORE_FLOW_ON=F,
 OBC_LONGSHORE_FLOW_FILE="default_lsf.dat                                                                 ",
 /
&NML_GRID_COORDINATES
 GRID_FILE="default_grd.dat                                                                 ",
 GRID_FILE_UNITS="Can be 'degrees' or 'meters'; certain make options required                     ",
 PROJECTION_REFERENCE="none: A recognized reference coordinate for projtion for PROJ4                                                                                                                                          ",
 SIGMA_LEVELS_FILE="default_sigma.dat                                                               ",
 DEPTH_FILE="default_dep.dat                                                                 ",
 CORIOLIS_FILE="default_cor.dat                                                                 ",
 SPONGE_FILE="default_spg.dat                                                                 ",
 /
&NML_GROUNDWATER
 GROUNDWATER_ON=F,
 GROUNDWATER_TEMP_ON=F,
 GROUNDWATER_SALT_ON=F,
 GROUNDWATER_KIND="Options:constant,static,time dependant,periodic,variable                        ",
 GROUNDWATER_FILE="default_grndwtr.nc                                                              ",
 GROUNDWATER_FLOW=  0.0000000000000000     ,
 GROUNDWATER_TEMP=  0.0000000000000000     ,
 GROUNDWATER_SALT=  0.0000000000000000     ,
 /
&NML_LAG
 LAG_PARTICLES_ON=F,
 LAG_START_FILE="init_lag.nc                                                                     ",
 LAG_OUT_FILE="lag_out.nc                                                                      ",
 LAG_FIRST_OUT="A Date or time                                                                  ",
 LAG_RESTART_FILE="lag_restart.nc                                                                  ",
 LAG_OUT_INTERVAL="A length of time: 'seconds= ','days= ', or 'cycles= '                           ",
 LAG_SCAL_CHOICE="none                                                                            ",
 /
&NML_ADDITIONAL_MODELS
 DATA_ASSIMILATION=F,
 DATA_ASSIMILATION_FILE="./default_run.nml                                                               ",
 BIOLOGICAL_MODEL=F,
 STARTUP_BIO_TYPE="'observed' use this option only now                                             ",
 SEDIMENT_MODEL=F,
 SEDIMENT_MODEL_FILE="DO NOT ADD UNTILL FVCOM IS RUNNING BY ITS SELF FIRST                            ",
 SEDIMENT_PARAMETER_TYPE="DO NOT ADD UNTILL FVCOM IS RUNNING BY ITS SELF FIRST                            ",
 SEDIMENT_PARAMETER_FILE="DO NOT ADD UNTILL FVCOM IS RUNNING BY ITS SELF FIRST                            ",
 BEDFLAG_TYPE="DO NOT ADD UNTIL FVCOM IS RUNNING BY ITS SELF FIRST                             ",
 BEDFLAG_FILE="DO NOT ADD UNTILL FVCOM IS RUNNING BY ITS SELF FIRST                            ",
 ICING_MODEL=F,
 ICING_FORCING_FILE="DO NOT ADD UNTILL FVCOM IS RUNNING BY ITS SELF FIRST                            ",
 ICING_FORCING_KIND="Options:constant,static,time dependant,periodic,variable                        ",
 ICING_AIR_TEMP=  0.0000000000000000     ,
 ICING_WSPD=  0.0000000000000000     ,
 ICE_MODEL=F,
 ICE_FORCING_FILE="DO NOT ADD UNTILL FVCOM IS RUNNING BY ITS SELF FIRST                            ",
 ICE_FORCING_KIND="Options:constant,static,time dependant,periodic,variable                        ",
 ICE_SEA_LEVEL_PRESSURE=  0.0000000000000000     ,
 ICE_AIR_TEMP=  0.0000000000000000     ,
 ICE_SPEC_HUMIDITY=  0.0000000000000000     ,
 ICE_SHORTWAVE=  0.0000000000000000     ,
 ICE_CLOUD_COVER=  0.0000000000000000     ,
 /
&NML_PROBES
 PROBES_ON=F,
 PROBES_NUMBER=          0,
 PROBES_FILE="Probe namelist file name                                                        ",
 /
&NML_BOUNDSCHK
 BOUNDSCHK_ON=F,
 CHK_INTERVAL=          0,
 VELOC_MAG_MAX=  0.0000000000000000     ,
 ZETA_MAG_MAX=  0.0000000000000000     ,
 TEMP_MAX=  0.0000000000000000     ,
 TEMP_MIN=  0.0000000000000000     ,
 SALT_MAX=  0.0000000000000000     ,
 SALT_MIN=  0.0000000000000000     ,
 /
&NML_HEATING_CALCULATED
 HEATING_CALCULATE_ON=F,
 HEATING_CALCULATE_TYPE="'flux' or 'body'                                                                ",
 HEATING_CALCULATE_FILE="default_hfx.nc                                                                  ",
 HEATING_CALCULATE_KIND="Options:constant,static,time dependant,periodic,variable                        ",
 ZUU=  2.0000000000000000     ,
 ZTT=  2.0000000000000000     ,
 ZQQ=  2.0000000000000000     ,
 AIR_TEMPERATURE=  0.0000000000000000     ,
 RELATIVE_HUMIDITY=  0.0000000000000000     ,
 SURFACE_PRESSURE=  0.0000000000000000     ,
 LONGWAVE_RADIATION=  0.0000000000000000     ,
 SHORTWAVE_RADIATION=  0.0000000000000000     ,
 HEATING_LONGWAVE_PERCTAGE_IN_HEATFLUX= 0.78000000000000003     ,
 HEATING_LONGWAVE_LENGTHSCALE_IN_HEATFLUX=  1.3999999999999999     ,
 HEATING_SHORTWAVE_LENGTHSCALE_IN_HEATFLUX=  6.2999999999999998     ,
 /
&NML_STATION_TIMESERIES
 OUT_STATION_TIMESERIES_ON=F,
 STATION_FILE="'none'                                                                          ",
 LOCATION_TYPE="'node' or 'cell'                                                                ",
 OUT_ELEVATION=F,
 OUT_VELOCITY_3D=F,
 OUT_VELOCITY_2D=F,
 OUT_WIND_VELOCITY=F,
 OUT_ATM_PRESSURE=F,
 OUT_SALT_TEMP=F,
 OUT_INTERVAL="A length of time: 'seconds= ','days= ', or 'cycles= '                           ",
 /